TransPHLA-AOMP:
A transformer-based model to predict peptide-HLA class I binding and optimize mutated peptides for vaccine design

Step 1: HLA-I sequence: The maximum length of the sequence is 34
Enter HLA-I sequence(s) in FASTA format

OR

You can select .fasta file containing HLA-I sequence(s)

Step 2: Peptide sequence: The length of the peptide sequence is 8-15
Do you want to cut the sequence larger than cut_length you choose below?
Cut length
Enter peptide sequence(s) in FASTA format

OR

You can select .fasta file containing peptide sequence(s)

Step 3: Output options
Do you want to get attention scores?
Do you want to save the images of attention scores?
Run the AOMP program to find higher affinity mutant peptides to the target HLA and high homology with original peptide?
Threshold to define predicted binder(0-1)? Recommended and default value is 0.5.